STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2UUbiquitin conjugating enzyme E2 U. (166 aa)    
Predicted Functional Partners:
ENSSPUP00000023555
annotation not available
   
 0.997
RNF20
Ring finger protein 20.
    
 0.990
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.985
RAD18
RAD18 E3 ubiquitin protein ligase.
    
 0.979
ENSSPUP00000015558
annotation not available
    
 0.943
TRIP12
Thyroid hormone receptor interactor 12.
    
 0.937
PCNA
Proliferating cell nuclear antigen.
   
 0.911
ENSSPUP00000003773
annotation not available
   
 0.893
UBA6
Ubiquitin like modifier activating enzyme 6.
   
 0.893
UBA1
Ubiquitin like modifier activating enzyme 1.
   
 0.893
Your Current Organism:
Sphenodon punctatus
NCBI taxonomy Id: 8508
Other names: Hatteria punctata, S. punctatus, hatteria, tuatara
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.