STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM23Tripartite motif containing 23. (568 aa)    
Predicted Functional Partners:
ENSSPUP00000015558
annotation not available
   
 0.995
ITSN2
Intersectin 2.
    
 0.956
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.953
ENSSPUP00000017180
annotation not available
   
 0.953
ITSN1
Intersectin 1.
    
 0.935
NME8
NME/NM23 family member 8.
  
 0.926
SHANK3
SH3 and multiple ankyrin repeat domains 3.
   
 0.870
ENSSPUP00000016526
annotation not available
   
 0.870
ENSSPUP00000004829
annotation not available
   
 0.865
ARF6
ADP ribosylation factor 6.
   
0.863
Your Current Organism:
Sphenodon punctatus
NCBI taxonomy Id: 8508
Other names: Hatteria punctata, S. punctatus, hatteria, tuatara
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