STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASB15Ankyrin repeat and SOCS box containing 15. (276 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.804
NFKBIB
NFKB inhibitor beta.
  
 
 0.725
COMMD1
Copper metabolism domain containing 1.
    
 0.722
CUL5
Cullin 5.
    
 0.721
COMMD8
COMM domain containing 8.
   
  0.710
ASB4
Ankyrin repeat and SOCS box containing 4.
  
 
 0.699
ENSSPUP00000022389
annotation not available
    
 0.688
ELOC
Elongin C.
    
 0.671
COMMD4
COMM domain containing 4.
    
 0.661
ENSSPUP00000020128
annotation not available
    
 0.659
Your Current Organism:
Sphenodon punctatus
NCBI taxonomy Id: 8508
Other names: Hatteria punctata, S. punctatus, hatteria, tuatara
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