STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPUP00000023909annotation not available (236 aa)    
Predicted Functional Partners:
YARS1
tyrosyl-tRNA synthetase 1.
  
 
 0.552
UROD
Uroporphyrinogen decarboxylase.
    
  0.503
ENSSPUP00000017537
annotation not available
    
  0.503
ENSSPUP00000017546
annotation not available
    
  0.503
KATNAL2
Katanin catalytic subunit A1 like 2.
     
 0.475
SSBP1
Single stranded DNA binding protein 1.
  
    0.456
ENSSPUP00000003455
annotation not available
      
 0.432
RPS6KC1
Ribosomal protein S6 kinase C1.
      
 0.432
ANGEL2
Angel homolog 2.
      
 0.431
LYPD6B
LY6/PLAUR domain containing 6B.
      
 0.430
Your Current Organism:
Sphenodon punctatus
NCBI taxonomy Id: 8508
Other names: Hatteria punctata, S. punctatus, hatteria, tuatara
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.