Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
afsK_1Serine/threonine-protein kinase AfsK. (785 aa)    
Predicted Functional Partners:
pstP_1
PP2C-family Ser/Thr phosphatase.
 
   0.838
pstP_2
PP2C-family Ser/Thr phosphatase.
 
 
 0.837
barA_2
Signal transduction histidine-protein kinase.
  
 0.807
garA_2
Glycogen accumulation regulator GarA.
 
 
 
 0.787
stkP_5
Serine/threonine-protein kinase StkP.
  
     0.773
surA
Chaperone SurA.
   
 
 0.710
mazG
Nucleoside triphosphate pyrophosphohydrolase.
     
  0.693
prkC_4
Serine/threonine-protein kinase PrkC.
  
     0.663
stp_5
Serine/threonine phosphatase stp.
 
   0.657
luxQ
Autoinducer 2 sensor kinase/phosphatase LuxQ.
   
 0.642
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.