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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xlnD3-hydroxybenzoate 6-hydroxylase 1. (425 aa)    
Predicted Functional Partners:
aroC_1
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
     
 0.774
bphC_1
Manganese-dependent 2,3-dihydroxybiphenyl 1,2-dioxygenase.
 
  
 0.679
T45_07972
Fatty acid hydroxylase superfamily protein.
   
 0.659
dhbF_8
Dimodular nonribosomal peptide synthase.
  
 0.648
mhpA_1
3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase.
  
     0.638
pobB
Phenoxybenzoate dioxygenase subunit beta.
  
  
 0.623
nagI
Gentisate 1,2-dioxygenase.
 
   
 0.620
phzD
Putative isochorismatase.
  
    0.616
pht2
Phthalate 4,5-dioxygenase oxygenase reductase.
  
  
 0.613
trpE_1
Anthranilate synthase component 1.
  
  
 0.598
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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