Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
stp_1Multidrug resistance protein stp. (503 aa)    
Predicted Functional Partners:
linC_1
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase.
       0.873
yvdP_1
Putative FAD-linked oxidoreductase YvdP.
       0.773
qdoI_1
Quercetin 2,3-dioxygenase.
       0.536
trpE_1
Anthranilate synthase component 1.
    
  0.510
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.484
aroH_1
Phospho-2-dehydro-3-deoxyheptonate aldolase; Belongs to the class-II DAHP synthase family.
       0.449
bmr3_6
Multidrug resistance protein 3.
  
     0.444
serB
Phosphoserine phosphatase.
     
  0.433
serA_3
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.426
acoA
Acetoin:2,6-dichlorophenolindophenol.
     
  0.414
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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