Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
crtB_1All-trans-phytoene synthase. (296 aa)    
Predicted Functional Partners:
crtB_2
All-trans-phytoene synthase.
  
  
  0.963
T45_03629
(2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.938
T45_06421
(2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.938
T45_01893
(2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.916
T45_05613
(2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.916
hepT
Heptaprenyl diphosphate synthase component 2; Belongs to the FPP/GGPP synthase family.
  
 0.896
uppS_1
Trans,polycis-polyprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
   
 
 0.863
T45_04172
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
 0.858
crtN
Dehydrosqualene desaturase.
 
 
 0.846
T45_07972
Fatty acid hydroxylase superfamily protein.
  
 0.832
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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