close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_00088Acetyltransferase (GNAT) family protein. (175 aa)    
Predicted Functional Partners:
panD
Aspartate 1-decarboxylase precursor; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
   
 
 0.906
T45_00086
Hypothetical protein.
   
   0.786
T45_00087
Hypothetical protein.
       0.583
T45_03494
Hypothetical protein.
  
    0.527
gbh
Guanidinobutyrase; Belongs to the arginase family.
  
 
 0.498
T45_02414
Acetyltransferase (GNAT) family protein.
  
     0.490
stp_5
Serine/threonine phosphatase stp.
  
 
   0.489
nagA
N-acetylglucosamine-6-phosphate deacetylase.
    
 0.479
T45_05526
Hypothetical protein.
   
    0.463
gpsA_1
Glycerol-3-phosphate dehydrogenase [NAD(P+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
   0.450
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.