Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_00114Tellurium resistance protein. (245 aa)    
Predicted Functional Partners:
yceD_2
General stress protein 16U.
    0.952
T45_00115
Integral membrane protein TerC family protein.
 
     0.899
yceD_3
General stress protein 16U.
    0.897
yceD_7
General stress protein 16U.
    0.858
yceD_4
General stress protein 16U.
    0.857
yceC_2
Stress response protein SCP2.
 
    0.827
yceC_3
Stress response protein SCP2.
 
    0.827
yceD_1
General stress protein 16U.
    0.821
yceC_1
Stress response protein SCP2.
 
    0.814
T45_01004
Hypothetical protein.
 
    0.811
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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