Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
neoA_12-deoxy-scyllo-inosamine dehydrogenase. (334 aa)    
Predicted Functional Partners:
dgoD_1
D-galactonate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
     0.888
fruA
PTS system fructose-specific EIIABC component.
  
 
 0.870
xylA_1
Xylose isomerase; Belongs to the xylose isomerase family.
     
 0.856
kdgK_5
2-dehydro-3-deoxygluconokinase.
   
 
  0.771
kdgK_8
2-dehydro-3-deoxygluconokinase; Belongs to the carbohydrate kinase PfkB family.
   
 
  0.771
korA
2-oxoglutarate oxidoreductase subunit KorA.
    
 0.770
xyoA
Putative xylitol oxidase.
     
  0.769
T45_05443
L-gulono-1,4-lactone dehydrogenase.
     
  0.769
adh_1
Alcohol dehydrogenase.
  
     0.767
T45_00158
Hypothetical protein.
 
     0.763
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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