sigC_1 protein (Streptomyces turgidiscabies)

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Score

sigC_1

ECF RNA polymerase sigma factor SigC; Belongs to the sigma-70 factor family. ECF subfamily. (229 aa)

Predicted Functional Partners:

rpoE

0.707

sigE_16

0.677

sigE_5

0.674

sigK_3

0.656

sigK_1

0.648

sigE_4

0.598

sigE_2

0.567

rpoC

0.563

rpoB_1

0.561

sigE_12

0.544

Your Current Organism:

Streptomyces turgidiscabies

NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rpoB_1	rpoC	T45_07178	T45_07177	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB_1	rpoE	T45_07178	T45_08571	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily.	0.598
rpoB_1	sigC_1	T45_07178	T45_00243	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigC; Belongs to the sigma-70 factor family. ECF subfamily.	0.561
rpoB_1	sigE_12	T45_07178	T45_06600	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.657
rpoB_1	sigE_16	T45_07178	T45_07562	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.608
rpoB_1	sigE_2	T45_07178	T45_00482	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.657
rpoB_1	sigE_4	T45_07178	T45_01409	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.737
rpoB_1	sigE_5	T45_07178	T45_01552	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.925
rpoB_1	sigK_1	T45_07178	T45_00841	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigK; Belongs to the sigma-70 factor family. ECF subfamily.	0.632
rpoB_1	sigK_3	T45_07178	T45_03522	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigK; Belongs to the sigma-70 factor family. ECF subfamily.	0.632
rpoC	rpoB_1	T45_07177	T45_07178	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	rpoE	T45_07177	T45_08571	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily.	0.561
rpoC	sigC_1	T45_07177	T45_00243	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigC; Belongs to the sigma-70 factor family. ECF subfamily.	0.563
rpoC	sigE_12	T45_07177	T45_06600	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.561
rpoC	sigE_16	T45_07177	T45_07562	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.561
rpoC	sigE_2	T45_07177	T45_00482	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.561
rpoC	sigE_4	T45_07177	T45_01409	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.561
rpoC	sigE_5	T45_07177	T45_01552	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.561
rpoC	sigK_1	T45_07177	T45_00841	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigK; Belongs to the sigma-70 factor family. ECF subfamily.	0.561
rpoC	sigK_3	T45_07177	T45_03522	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigK; Belongs to the sigma-70 factor family. ECF subfamily.	0.561

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