close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araQ_1L-arabinose transport system permease protein. (294 aa)    
Predicted Functional Partners:
malF
Maltose transport system permease protein MalF.
 
   0.970
T45_00261
Bacterial extracellular solute-binding protein.
 
  0.963
sugC
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
 
 0.936
ugpA_1
SN-glycerol 3-phosphate transport system permease.
 
  0.906
lacF_15
Lactose transport system permease protein LacF.
  0.904
lacF_2
Lactose transport system permease protein LacF.
 0.894
lacF_17
Lactose transport system permease protein LacF.
 0.894
lacF_8
Lactose transport system permease protein LacF.
 
 0.893
lacF_4
Lactose transport system permease protein LacF.
  0.892
ycjO_3
Inner membrane ABC transporter permease protein.
 0.887
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.