Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_00302Hypothetical protein. (375 aa)    
Predicted Functional Partners:
T45_00303
Hypothetical protein.
       0.723
T45_00304
Hypothetical protein.
       0.677
T45_00301
Hypothetical protein.
       0.594
uvrD2
ATP-dependent DNA helicase UvrD2.
    
  0.445
uvrD
DNA helicase II; Belongs to the helicase family. UvrD subfamily.
    
  0.442
uvrD1_1
ATP-dependent DNA helicase UvrD1; Belongs to the helicase family. UvrD subfamily.
    
  0.439
uvrD1_2
ATP-dependent DNA helicase UvrD1.
    
  0.439
T45_07609
DNA-dependent helicase II.
    
  0.439
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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