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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbiX_1Sirohydrochlorin cobaltochelatase. (302 aa)    
Predicted Functional Partners:
nasF_1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
 
 0.997
cbiH
cobalt-precorrin-3B C(17-methyltransferase.
 
  
 0.960
nasF_2
uroporphyrinogen-III C-methyltransferase.
 
 
 0.936
cobL_1
precorrin-6Y C(5,15)-methyltransferase.
 
  
 0.932
cobL_2
precorrin-6Y C(5,15)-methyltransferase.
 
  
 0.930
cobI
Precorrin-2 C(20-methyltransferase; Belongs to the precorrin methyltransferase family.
 
  
 0.855
hemD_2
Bifunctional uroporphyrinogen-III synthetase/response regulator domain protein.
 
 
 0.767
dgt
Deoxyguanosinetriphosphate triphosphohydrolase; Belongs to the dGTPase family. Type 2 subfamily.
       0.762
cbiD
cobalt-precorrin-6A synthase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
   
 0.744
cobB_3
Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
  
 0.705
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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