Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
phoR_2Alkaline phosphatase synthesis sensor protein. (609 aa)    
Predicted Functional Partners:
barA_2
Signal transduction histidine-protein kinase.
   
 0.979
sphR_1
Alkaline phosphatase synthesis transcriptional.
 
  0.969
luxQ
Autoinducer 2 sensor kinase/phosphatase LuxQ.
   
 0.944
phoP_1
Alkaline phosphatase synthesis transcriptional.
 
  0.870
sphR_2
Alkaline phosphatase synthesis transcriptional.
 
  0.862
mprA_7
Response regulator MprA.
 
  0.805
phoP_3
Alkaline phosphatase synthesis transcriptional.
 
  0.785
walR
Transcriptional regulatory protein WalR.
 
  0.780
acoA
Acetoin:2,6-dichlorophenolindophenol.
    
 0.778
afsQ1_3
Transcriptional regulatory protein AfsQ1.
 
  0.776
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.