STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nagC_1N-acetylglucosamine repressor. (407 aa)    
Predicted Functional Partners:
fruA
PTS system fructose-specific EIIABC component.
    
 0.893
nagC_9
N-acetylglucosamine repressor.
  
     0.768
glcB
PTS system glucoside-specific EIICBA component.
  
 0.716
ptsG
PTS system glucose-specific EIICB component.
  
 0.716
ppgK
Polyphosphate glucokinase.
  
  
 0.614
ygjK
Glucosidase YgjK precursor.
       0.607
gdhB_1
Quinoprotein glucose dehydrogenase B precursor.
    
  0.600
T45_00438
Amylo-alpha-1,6-glucosidase.
       0.580
mro_1
Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer.
 
  
 0.572
mro_2
Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer.
 
  
 0.571
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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