Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
T45_00447Putative ABC transporter ATP-binding protein. (230 aa)    
Predicted Functional Partners:
ytrF_1
ABC transporter permease YtrF precursor.
 
  0.976
T45_06287
FtsX-like permease family protein.
  
 0.942
macB_2
Macrolide export ATP-binding/permease protein.
 0.822
macB_3
Macrolide export ATP-binding/permease protein.
 
  0.755
ytrF_3
ABC transporter permease YtrF precursor.
 
  0.751
ftsH_1
ATP-dependent zinc metalloprotease FtsH; Belongs to the AAA ATPase family.
  
     0.747
narX_1
Nitrate/nitrite sensor protein NarX.
       0.725
macB_6
Macrolide export ATP-binding/permease protein.
 0.722
T45_00819
FtsX-like permease family protein.
  
  0.659
T45_07061
Hypothetical protein.
  
  0.659
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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