Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
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[Homology]
Score
T45_00480Beta-lactamase precursor. (243 aa)    
Predicted Functional Partners:
quiP
Acyl-homoserine lactone acylase QuiP precursor.
     
  0.850
acyII
Penicillin acylase 2 precursor.
     
  0.850
T45_01036
Putative peptidoglycan binding domain protein.
    
 0.641
aac_1
aculeacin-A acylase precursor.
     
  0.619
dacB
D-alanyl-D-alanine carboxypeptidase DacB.
     
 0.569
pbpB
Penicillin-binding protein PbpB.
    
 0.459
T45_00479
Hypothetical protein.
       0.430
murAA_2
UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
      
 0.422
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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