Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_00527Hypothetical protein; Degrades oligopeptides; Belongs to the peptidase S41B family. (1083 aa)    
Predicted Functional Partners:
yrrB
TPR repeat-containing protein YrrB.
  
 0.941
T45_00528
Hypothetical protein.
     
 0.659
T45_02456
Hypothetical protein.
  
 
   0.653
amy
Alpha-amylase precursor; Belongs to the glycosyl hydrolase 13 family.
    
  0.637
T45_01591
Hypothetical protein.
  
 
   0.624
T45_04014
Hypothetical protein.
  
 
   0.623
T45_01593
Hypothetical protein.
  
 
   0.617
rsmE
Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.547
T45_00530
Nitronate monooxygenase.
       0.547
T45_02132
Calerythrin.
  
     0.539
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.