Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
afsQ1_1Transcriptional regulatory protein AfsQ1. (191 aa)    
Predicted Functional Partners:
luxQ
Autoinducer 2 sensor kinase/phosphatase LuxQ.
 
0.993
barA_2
Signal transduction histidine-protein kinase.
 
0.990
T45_00536
Stage II sporulation protein E (SpoIIE).
 
 
  0.831
kinB
Alginate biosynthesis sensor protein KinB.
     0.804
rsbP_1
Phosphoserine phosphatase RsbP.
  
 0.791
trxB_3
Thioredoxin reductase.
  
 0.789
rsbU_3
Phosphoserine phosphatase RsbU.
 
 0.779
T45_09072
Sensory histidine kinase AtoS.
  
 0.757
gmr_2
Cyclic di-GMP phosphodiesterase Gmr.
  
 0.751
T45_07062
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 0.749
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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