Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_00633Hypothetical protein. (589 aa)    
Predicted Functional Partners:
guaA_2
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
    
 0.724
T45_00634
RNA pyrophosphohydrolase; Belongs to the Nudix hydrolase family.
       0.709
aprX_1
Serine protease AprX; Belongs to the peptidase S8 family.
 
     0.678
T45_01621
Hypothetical protein.
  
     0.629
T45_04050
Ankyrin repeats (3 copies.
   
  0.597
T45_07413
Putative lyase.
   
  0.597
T45_02548
Hypothetical protein.
    
  0.589
T45_08148
Ankyrin repeats (3 copies.
    
  0.589
T45_00632
D-alanyl-D-alanine carboxypeptidase precursor.
  
    0.553
T45_08312
Hypothetical protein.
  
     0.529
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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