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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_00640Helix-turn-helix domain protein. (340 aa)    
Predicted Functional Partners:
chiA2_2
Chitinase precursor.
  
     0.631
T45_09326
Bacterial regulatory proteins, tetR family.
  
     0.597
T45_06576
Hypothetical protein.
  
     0.589
T45_07193
CGNR zinc finger.
  
     0.563
T45_04483
Phosphotransferase enzyme family protein.
  
     0.555
T45_08166
Hypothetical protein.
  
     0.553
T45_00641
Putative peptidoglycan binding domain protein.
       0.525
cwhA_2
N-acetylmuramoyl-L-alanine amidase A.
  
     0.516
tetM
Tetracycline resistance protein TetM from.
  
     0.470
T45_05048
Hypothetical protein.
  
     0.446
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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