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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_00658Hypothetical protein. (496 aa)    
Predicted Functional Partners:
glnH_1
ABC transporter glutamine-binding protein GlnH precursor; Belongs to the bacterial solute-binding protein 3 family.
 
  
 0.991
pknG_1
Serine/threonine-protein kinase PknG.
 
  
 0.990
T45_00660
Hypothetical protein.
 
     0.886
T45_00664
FHA domain protein.
 
     0.852
stp_5
Serine/threonine phosphatase stp.
 
     0.844
T45_00663
Von Willebrand factor type A domain protein.
 
     0.839
msmE_1
Multiple sugar-binding protein precursor.
       0.731
lacF_1
Lactose transport system permease protein LacF.
       0.731
araQ_2
L-arabinose transport system permease protein.
       0.731
licH
Putative 6-phospho-beta-glucosidase.
       0.731
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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