xerD_1 protein (Streptomyces turgidiscabies)

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Score

xerD_1

Tyrosine recombinase XerD. (320 aa)

Predicted Functional Partners:

pta

0.620

korA

0.551

yedK

0.494

T45_03568

0.472

rpsT

0.467

kgd

0.467

nudF_3

0.451

rplW

0.443

rplU

0.431

whiA

0.422

Your Current Organism:

Streptomyces turgidiscabies

NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T45_03568	xerD_1	T45_03568	T45_00675	Prephenate dehydrogenase.	Tyrosine recombinase XerD.	0.472
kgd	korA	T45_01930	T45_07222	Multifunctional 2-oxoglutarate metabolism enzyme.	2-oxoglutarate oxidoreductase subunit KorA.	0.938
kgd	pta	T45_01930	T45_02080	Multifunctional 2-oxoglutarate metabolism enzyme.	Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.	0.975
kgd	xerD_1	T45_01930	T45_00675	Multifunctional 2-oxoglutarate metabolism enzyme.	Tyrosine recombinase XerD.	0.467
korA	kgd	T45_07222	T45_01930	2-oxoglutarate oxidoreductase subunit KorA.	Multifunctional 2-oxoglutarate metabolism enzyme.	0.938
korA	pta	T45_07222	T45_02080	2-oxoglutarate oxidoreductase subunit KorA.	Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.	0.989
korA	xerD_1	T45_07222	T45_00675	2-oxoglutarate oxidoreductase subunit KorA.	Tyrosine recombinase XerD.	0.551
nudF_3	xerD_1	T45_03584	T45_00675	ADP-ribose pyrophosphatase.	Tyrosine recombinase XerD.	0.451
pta	kgd	T45_02080	T45_01930	Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.	Multifunctional 2-oxoglutarate metabolism enzyme.	0.975
pta	korA	T45_02080	T45_07222	Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.	2-oxoglutarate oxidoreductase subunit KorA.	0.989
pta	xerD_1	T45_02080	T45_00675	Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.	Tyrosine recombinase XerD.	0.620
rplU	rplW	T45_00572	T45_04409	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.996
rplU	rpsT	T45_00572	T45_00541	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.995
rplU	xerD_1	T45_00572	T45_00675	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Tyrosine recombinase XerD.	0.431
rplW	rplU	T45_04409	T45_00572	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.996
rplW	rpsT	T45_04409	T45_00541	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.980
rplW	xerD_1	T45_04409	T45_00675	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	Tyrosine recombinase XerD.	0.443
rpsT	rplU	T45_00541	T45_00572	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.995
rpsT	rplW	T45_00541	T45_04409	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.980
rpsT	xerD_1	T45_00541	T45_00675	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	Tyrosine recombinase XerD.	0.467