Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
betA_1Oxygen-dependent choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. (559 aa)    
Predicted Functional Partners:
prr_2
Gamma-aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.830
prr_1
Gamma-aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.816
T45_00733
Hypothetical protein; Belongs to the methylenetetrahydrofolate reductase family.
 
     0.814
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
     
  0.770
plcN
Non-hemolytic phospholipase C precursor.
     
  0.770
korA
2-oxoglutarate oxidoreductase subunit KorA.
     
  0.740
gbsA_2
Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.712
gbsA_1
Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.710
T45_04622
stearoyl-CoA 9-desaturase electron transfer.
    
 0.658
vgb_2
Virginiamycin B lyase.
   
 
 0.658
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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