Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
kdgR_1Transcriptional regulator KdgR. (287 aa)    
Predicted Functional Partners:
accA1_1
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
  
 
  0.832
kipI
Kinase A inhibitor.
  
    0.811
kdgR_7
Pectin degradation repressor protein KdgR.
  
     0.773
rhmR_1
Putative HTH-type transcriptional regulator.
  
     0.771
pobR_2
P-hydroxybenzoate hydroxylase transcriptional activator.
  
     0.726
pobR_1
P-hydroxybenzoate hydroxylase transcriptional activator.
  
     0.694
T45_00733
Hypothetical protein; Belongs to the methylenetetrahydrofolate reductase family.
 
     0.623
mlr_1
4-methylaminobutanoate oxidase; Belongs to the GcvT family.
 
     0.618
accA
Acetyl-coenzyme A carboxylase carboxyl.
     
  0.616
korA
2-oxoglutarate oxidoreductase subunit KorA.
     
  0.616
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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