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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hcaE_13-phenylpropionate/cinnamic acid dioxygenase. (374 aa)    
Predicted Functional Partners:
hcaC_1
3-phenylpropionate/cinnamic acid dioxygenase.
 
  
 0.968
T45_02985
Hypothetical protein.
  
 0.958
T45_03223
SnoaL-like domain protein.
  
 0.958
mlr_1
4-methylaminobutanoate oxidase; Belongs to the GcvT family.
 
 
 0.915
hmp_4
3-ketosteroid-9-alpha-hydroxylase reductase.
  
 
 0.877
camA_1
Putidaredoxin reductase.
  
 
 0.870
thcD_2
Rhodocoxin reductase.
  
 
 0.870
bedA
Benzene 1,2-dioxygenase system ferredoxin--NAD(+) reductase subunit.
 
  
  0.832
hcaC_2
3-phenylpropionate/cinnamic acid dioxygenase.
    
 0.814
ndoR
ferredoxin--NAD(P) (+) reductase (naphthalene dioxygenase ferredoxin-specific); Belongs to the globin family.
  
 
 0.801
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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