Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
crp_2CAMP receptor protein. (224 aa)    
Predicted Functional Partners:
gltB_1
Glutamate synthase [NADPH] large chain.
    
 0.876
barA_2
Signal transduction histidine-protein kinase.
   
 0.861
T45_01573
PH-sensitive adenylate cyclase.
 
 0.846
crp_4
CAMP-activated global transcriptional regulator.
  
  
 
0.809
crp_7
CAMP receptor protein.
  
  
 
0.803
crp_6
CAMP-activated global transcriptional regulator.
  
  
 
0.795
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.773
accA1_1
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
     
  0.767
korA
2-oxoglutarate oxidoreductase subunit KorA.
    
 0.754
T45_03606
Cyclic nucleotide-binding domain protein.
     
  0.743
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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