Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
T45_00820FtsX-like permease family protein. (920 aa)    
Predicted Functional Partners:
T45_00819
FtsX-like permease family protein.
 
 
 0.973
lolD_2
Lipoprotein-releasing system ATP-binding protein.
 
  0.963
ytrE_1
ABC transporter ATP-binding protein YtrE.
 
  0.796
T45_00829
Putative peptidoglycan binding domain protein.
  
 
 0.697
cvaA
Colicin V secretion protein CvaA.
  
  
 0.639
T45_08705
Heat-inducible protein.
    
   0.544
glbO
Group 2 truncated hemoglobin GlbO.
       0.519
T45_06604
Chloramphenicol 3-O phosphotransferase.
  
     0.491
hslR
Heat shock protein 15.
   
    0.489
T45_01752
Phosphotransferase enzyme family protein.
  
     0.481
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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