Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
regX3_1Sensory transduction protein regX3. (227 aa)    
Predicted Functional Partners:
barA_2
Signal transduction histidine-protein kinase.
  
 0.985
baeS_2
Signal transduction histidine-protein kinase.
 
   0.977
senX3
Signal-transduction histidine kinase senX3.
 
 0.964
luxQ
Autoinducer 2 sensor kinase/phosphatase LuxQ.
  
 0.958
T45_09072
Sensory histidine kinase AtoS.
  
 0.936
mtrB_1
Sensor histidine kinase MtrB.
  
 0.855
tcrY_4
Putative sensor histidine kinase TcrY.
 
  0.853
regX3_2
Sensory transduction protein regX3.
     
  0.850
mtrB_2
Sensor histidine kinase MtrB.
  
  0.848
cusS_1
Sensor kinase CusS.
 
  0.845
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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