Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
T45_00902Hypothetical protein. (424 aa)    
Predicted Functional Partners:
T45_06173
Endoglucanase E1 precursor.
  
 0.812
engD
Endoglucanase D precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 0.812
xynAS9_4
Endo-1,4-beta-xylanase A precursor.
  
 0.777
nadE
Glutamine-dependent NAD(+)synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
   
  0.620
pelA_2
Pectate trisaccharide-lyase precursor.
     
 0.617
chtA
Chitinase 63 precursor; Belongs to the glycosyl hydrolase 18 family.
  
 0.567
stp_15
Multidrug resistance protein stp; Belongs to the major facilitator superfamily.
  
    0.451
T45_01078
Cysteine-rich secretory protein family protein.
   
    0.443
T45_05796
Cysteine-rich secretory protein family protein.
   
    0.443
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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