Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
Experiments
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[Homology]
Score
T45_00907Hypothetical protein. (296 aa)    
Predicted Functional Partners:
pksN
Polyketide synthase PksN; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
    
 0.809
cdsA
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.802
plsC_6
1-acyl-sn-glycerol-3-phosphate acyltransferase.
    
  0.765
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
       0.740
glpD_1
Aerobic glycerol-3-phosphate dehydrogenase.
    
 0.740
glpD_2
Aerobic glycerol-3-phosphate dehydrogenase.
    
 0.740
T45_02489
Hypothetical protein.
  
     0.730
T45_07972
Fatty acid hydroxylase superfamily protein.
   
 0.724
T45_01548
VanZ like family protein.
  
     0.720
gpsA_1
Glycerol-3-phosphate dehydrogenase [NAD(P+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
     
  0.715
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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