Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
femX_1Lipid II:glycine glycyltransferase. (381 aa)    
Predicted Functional Partners:
T45_01312
Alanine racemase.
 
     0.791
T45_01517
Hypothetical protein.
 
    0.772
T45_03081
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthase.
    
 0.635
T45_07408
Hypothetical protein.
 
    0.632
cobB_1
Cobyrinic acid A,C-diamide synthase.
     
  0.578
uvrD
DNA helicase II; Belongs to the helicase family. UvrD subfamily.
 
     0.572
T45_03902
Hypothetical protein.
  
     0.540
ftsW_4
Lipid II flippase FtsW; Belongs to the SEDS family.
  
 
 0.536
T45_06503
Hypothetical protein.
  
     0.530
T45_00915
Cytochrome P450 107B1.
       0.509
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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