STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_01034Putative esterase. (438 aa)    
Predicted Functional Partners:
lysX_2
Lysylphosphatidylglycerol biosynthesis.
 
   
 0.714
adhD_1
Putative alcohol dehydrogenase D.
  
 0.694
T45_00740
S-(hydroxymethylmycothiol dehydrogenase.
  
 0.694
adhD_2
Putative alcohol dehydrogenase D.
  
 0.694
T45_03747
S-(hydroxymethylmycothiol dehydrogenase.
  
 0.694
xylB_3
Aryl-alcohol dehydrogenase.
  
 0.694
lysX_1
Lysylphosphatidylglycerol biosynthesis.
 
   
 0.693
dhbF_8
Dimodular nonribosomal peptide synthase.
    
 0.681
lgrD_2
Linear gramicidin synthase subunit D.
    
 0.576
cmdD_1
Chondramide synthase cmdD.
    
 0.540
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.