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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_01038Retaining alpha-galactosidase precursor. (656 aa)    
Predicted Functional Partners:
bglX_3
Periplasmic beta-glucosidase precursor.
  
  
  0.886
bglB
Thermostable beta-glucosidase B.
  
  
  0.873
agaA_3
Alpha-galactosidase A precursor.
  
  
  0.865
xyl3A_1
Xylan 1,4-beta-xylosidase precursor.
  
  
  0.849
malQ
4-alpha-glucanotransferase.
    
 0.841
xyl3A_2
Xylan 1,4-beta-xylosidase precursor.
  
  
  0.839
treS
Trehalose synthase/amylase TreS.
    
  0.832
yicI_4
Alpha-xylosidase; Belongs to the glycosyl hydrolase 31 family.
    
  0.832
agaA_4
Alpha-galactosidase A precursor.
 
  
 0.819
bglX_1
Periplasmic beta-glucosidase precursor.
  
  
  0.801
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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