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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhjE_1Inner membrane metabolite transport protein. (456 aa)    
Predicted Functional Partners:
mprA_2
Transcriptional repressor MprA.
      
 0.621
pcaK_1
4-hydroxybenzoate transporter PcaK.
  
     0.563
iolT
Major myo-inositol transporter IolT.
  
     0.539
rpiB_2
Ribose-5-phosphate isomerase B.
     
 0.505
T45_01078
Cysteine-rich secretory protein family protein.
    
  0.495
maoC_7
Putative enoyl-CoA hydratase 1.
      
 0.475
maoC_3
Putative enoyl-CoA hydratase 1.
      
 0.475
yveA_1
Aspartate-proton symporter.
  
   0.432
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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