Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
qacA_1Antiseptic resistance protein. (501 aa)    
Predicted Functional Partners:
efpA_6
Putative MFS-type transporter EfpA.
  
     0.769
stp_9
Multidrug resistance protein stp.
  
     0.758
fabG1_1
3-oxoacyl-[acyl-carrier-protein] reductase.
  
    0.570
fabF_2
3-oxoacyl-[acyl-carrier-protein] synthase 2; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
    0.540
T45_01083
Acyl carrier protein.
       0.539
T45_01084
Hypothetical protein.
       0.539
T45_01086
Hypothetical protein.
       0.539
lcfB_3
long-chain-fatty-acid--CoA ligase.
       0.539
T45_01088
Hypothetical protein.
       0.539
chmD
DTDP-4-oxo-6-deoxy-D-allose reductase.
       0.539
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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