Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
aprX_3Serine protease AprX; Belongs to the peptidase S8 family. (1119 aa)    
Predicted Functional Partners:
lieA_2
Leupeptin-inactivating enzyme 1 precursor.
 
  
 0.688
cpt
Carboxypeptidase T precursor.
  
 0.673
ytrB
ABC transporter ATP-binding protein YtrB.
 
 
   0.612
T45_01102
ABC-2 family transporter protein.
 
     0.557
ytrA_2
HTH-type transcriptional repressor YtrA.
       0.500
wapA_6
tRNA3(Ser-specific nuclease WapA precursor.
  
    0.457
wapA_10
tRNA nuclease WapA precursor.
  
    0.455
T45_02218
Glucan endo-1,3-beta-glucosidase precursor.
  
    0.454
scpD
Zinc carboxypeptidase precursor.
  
  
 0.446
wapA_2
tRNA nuclease WapA precursor.
  
    0.443
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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