Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
T45_01182Glucan endo-1,3-beta-glucosidase precursor. (407 aa)    
Predicted Functional Partners:
cex
Exoglucanase/xylanase precursor.
   
 
 0.754
glcA
Glucan endo-1,3-beta-glucosidase A1 precursor.
   
 0.674
abfB_1
Extracellular exo-alpha-L-arabinofuranosidase precursor.
 
 
   0.656
T45_06974
Necrosis inducing protein NPP1.
  
     0.636
T45_01184
Necrosis inducing protein NPP1.
  
     0.624
T45_04972
Necrosis inducing protein NPP1.
  
     0.617
sprD_3
streptogrisin-D precursor.
  
     0.511
chtA
Chitinase 63 precursor; Belongs to the glycosyl hydrolase 18 family.
 
 
 
 0.511
T45_09240
alpha-L-arabinofuranosidase B (ABFB.
  
     0.507
sprB
streptogrisin-B precursor.
  
     0.493
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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