Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pknB_2Serine/threonine-protein kinase PknB. (573 aa)    
Predicted Functional Partners:
pstP_1
PP2C-family Ser/Thr phosphatase.
 
 
 0.964
pstP_2
PP2C-family Ser/Thr phosphatase.
 
 
 0.963
garA_2
Glycogen accumulation regulator GarA.
 
 
 
 0.920
stp_5
Serine/threonine phosphatase stp.
 
 
 0.917
fhaB
FHA domain-containing protein FhaB.
 
 
 
 0.853
fhaA
FHA domain-containing protein FhaA.
 
 
 
 0.851
garA_1
Glycogen accumulation regulator GarA.
 
 
 
 0.846
T45_05313
ABC transporter ATP-binding/permease protein.
  
 
 0.833
T45_07947
ABC transporter ATP-binding/permease protein.
  
 
 0.833
T45_07426
FtsK/SpoIIIE family protein.
   
 
 0.831
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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