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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bkdCDihydrolipoyllysine-residue acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex. (456 aa)    
Predicted Functional Partners:
bkdB_2
3-methyl-2-oxobutanoate dehydrogenase subunit.
 
 0.999
acoA
Acetoin:2,6-dichlorophenolindophenol.
 
 0.999
bkdB_1
3-methyl-2-oxobutanoate dehydrogenase subunit.
 
 0.998
bkdA_2
3-methyl-2-oxobutanoate dehydrogenase subunit.
 
 0.998
kgd
Multifunctional 2-oxoglutarate metabolism enzyme.
 
0.998
pdhD
Dihydrolipoyl dehydrogenase.
 0.997
bkdA_1
3-methyl-2-oxobutanoate dehydrogenase subunit.
 
 0.995
lpdC
Dihydrolipoyl dehydrogenase.
 0.993
bkdA_3
3-methyl-2-oxobutanoate dehydrogenase subunit.
 
 0.992
bkdB_3
3-methyl-2-oxobutanoate dehydrogenase subunit; Belongs to the 2-oxoacid dehydrogenase family.
 
0.987
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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