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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mviNPutative peptidoglycan biosynthesis protein. (755 aa)    
Predicted Functional Partners:
fhaA
FHA domain-containing protein FhaA.
  
 
 
 0.993
prkC_4
Serine/threonine-protein kinase PrkC.
 
    0.883
T45_01304
Hypothetical protein.
 
   
 0.842
T45_01300
Hypothetical protein.
 
     0.785
garA_2
Glycogen accumulation regulator GarA.
  
 
   0.744
cca
CCA-adding enzyme; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.715
sigM_1
ECF RNA polymerase sigma factor SigM; Belongs to the sigma-70 factor family. ECF subfamily.
       0.663
fhaB
FHA domain-containing protein FhaB.
  
 
 
 0.656
ftsW_2
Lipid II flippase FtsW; Belongs to the SEDS family.
 
  
 0.621
trxA_1
Thioredoxin-1; Belongs to the thioredoxin family.
       0.616
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.