Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
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Co-expression
Experiments
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[Homology]
Score
T45_01357ABC-2 family transporter protein. (301 aa)    
Predicted Functional Partners:
yxlF_2
Putative ABC transporter ATP-binding protein.
 
   0.979
yxlF_3
Putative ABC transporter ATP-binding protein.
 
   0.979
T45_01359
ABC-2 family transporter protein.
 
     0.968
T45_01360
Hypothetical protein.
       0.749
kptA
RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
       0.664
sadH_1
Putative oxidoreductase SadH.
       0.659
T45_01352
Hypothetical protein.
       0.640
T45_00870
Hypothetical protein.
  
     0.625
fgd1_2
F420-dependent glucose-6-phosphate dehydrogenase.
       0.617
yidA_1
Sugar phosphatase YidA.
       0.609
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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