Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
T45_01385Phage integrase family protein; Belongs to the 'phage' integrase family. (464 aa)    
Predicted Functional Partners:
T45_01386
Helix-turn-helix domain protein.
 
   
 0.961
T45_01387
Hypothetical protein.
 
    0.871
T45_02004
Helix-turn-helix domain protein.
 
   
 0.804
T45_05584
Helix-turn-helix domain protein.
 
   
 0.804
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
  0.620
T45_03278
Hypothetical protein.
  
     0.620
T45_04834
Hypothetical protein.
  
     0.619
T45_05145
Hypothetical protein.
  
     0.569
korA
2-oxoglutarate oxidoreductase subunit KorA.
     
  0.551
T45_08919
Helix-turn-helix domain protein.
  
     0.542
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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