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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_01458Carboxymuconolactone decarboxylase family; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (163 aa)    
Predicted Functional Partners:
sigJ_2
ECF RNA polymerase sigma factor SigJ; Belongs to the sigma-70 factor family.
 
    0.609
T45_03880
Carboxymuconolactone decarboxylase family.
  
 
 0.601
sigJ_1
ECF RNA polymerase sigma factor SigJ; Belongs to the sigma-70 factor family.
 
    0.590
T45_01467
Hypothetical protein.
       0.550
ygiC
Putative acid--amine ligase YgiC.
       0.550
sigJ_3
ECF RNA polymerase sigma factor SigJ; Belongs to the sigma-70 factor family.
 
    0.549
catD_2
3-oxoadipate enol-lactonase 2.
  
 
 0.546
catD_4
3-oxoadipate enol-lactonase 2.
  
 
 0.546
sigJ_4
ECF RNA polymerase sigma factor SigJ; Belongs to the sigma-70 factor family.
 
    0.519
T45_01457
Hypothetical protein.
       0.496
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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