Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
paaF_12,3-dehydroadipyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (268 aa)    
Predicted Functional Partners:
mmgB
Putative 3-hydroxybutyryl-CoA dehydrogenase.
 0.938
barA_2
Signal transduction histidine-protein kinase.
  
 0.917
fadB2_1
3-hydroxybutyryl-CoA dehydrogenase.
  0.915
fadB2_2
3-hydroxybutyryl-CoA dehydrogenase.
 0.899
pks2
Phthioceranic/hydroxyphthioceranic acid.
  
 0.893
dhbF_8
Dimodular nonribosomal peptide synthase.
  
 0.867
paaH
3-hydroxyadipyl-CoA dehydrogenase.
 0.841
luxQ
Autoinducer 2 sensor kinase/phosphatase LuxQ.
  
 0.823
fadB2_3
3-hydroxybutyryl-CoA dehydrogenase.
 0.761
cph2_1
Phytochrome-like protein cph2.
       0.741
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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