Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
T45_01581Macrolide transporter ATP-binding /permease. (497 aa)    
Predicted Functional Partners:
lolD_3
Lipoprotein-releasing system ATP-binding protein.
 
 0.893
lolD_8
Lipoprotein-releasing system ATP-binding protein.
 
 0.826
T45_00829
Putative peptidoglycan binding domain protein.
  
 
 0.765
cvaA
Colicin V secretion protein CvaA.
  
  
 0.725
hslR
Heat shock protein 15.
  
    0.718
macB_1
Macrolide export ATP-binding/permease protein.
 
 0.680
macB_7
Macrolide export ATP-binding/permease protein.
 
 0.678
yqjA_2
Inner membrane protein YqjA.
  
    0.666
yqjA_1
Inner membrane protein YqjA.
  
    0.659
T45_00447
Putative ABC transporter ATP-binding protein.
  
 0.610
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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