Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fprA2Flavo-diiron protein FprA2. (278 aa)    
Predicted Functional Partners:
lcp
Latex clearing protein precursor.
  
  
 0.809
barA_2
Signal transduction histidine-protein kinase.
     
 0.681
T45_00378
Hypothetical protein.
  
     0.621
T45_06811
Hypothetical protein.
  
     0.582
T45_01059
NADPH-dependent FMN reductase.
  
 
 0.563
ywqN
Putative NAD(P)H-dependent FMN-containing.
  
 
 0.563
msrA3
Peptide methionine sulfoxide reductase MsrA 3; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.543
T45_05978
Putative pit accessory protein.
   
    0.488
T45_06913
Hypothetical protein.
  
     0.487
T45_06813
Hypothetical protein.
  
  
  0.484
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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