Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_01613Von Willebrand factor type A domain protein. (520 aa)    
Predicted Functional Partners:
T45_01612
Hypothetical protein.
 
     0.969
T45_01615
Hypothetical protein.
 
     0.966
telA
Toxic anion resistance protein (TelA).
 
     0.926
T45_06964
Hypothetical protein.
  
     0.592
T45_00279
Hypothetical protein.
  
     0.583
T45_00898
Hypothetical protein.
  
     0.536
T45_02590
VWA domain containing CoxE-like protein.
  
  
  0.500
T45_01616
Hypothetical protein.
       0.467
T45_01071
Carbohydrate diacid transcriptional activator.
  
     0.451
sapA_2
Spore-associated protein A precursor.
  
     0.437
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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